Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954259.1_cds_XP_016493165.1_83303
CDS Infomation

[gene=LOC107812541] [db_xref=GeneID:107812541] [protein=putative late blight resistance protein homolog R1A-10] [partial=3'] [protein_id=XP_016493165.1] [location=complement(<56..1380)] [gbkey=CDS]
Sequence

ATGGAATTTGAAGAACTAGTGGGATTTCGTGAATATGTAAATGTTATGATTCGCCAATTG
GTGCGCGAGCCTAGAGACCTGGACGTTATCTCGATTGTTGGAATGGCTGGACAAGGAAAA
ACAGCTTTGACTAGAAAGGTATACAATAATCATTATATTGTTGATCACTTTGATGTTCGA
GCATGGTGCTCCATTTCAAAAATATATAATCGGAGAAAGTTGTGGCTTGATATTCTAAAA
CAAATTAAGGGTGATAAGCGTGATACTGTAGATGATGACTATAGCATAGCTGACATGTTG
CGCAAAAGTCTATATGGAAGGAGATATCTCATCATATTGGATGACATATGGGAAGTCAGG
GCATGGGATGACTTGCGATTATGTTTCCCTAATACAGAAAATGGAAGTAGAATAATGGTA
ACAACTCGAGATGTACATGTGGCTATGCATATTAAGCACCATAGTGATCCTTGTTTGCTT
CCATTTCTAAAGGACGAAGAGAGTTGGGAATTATTGCAGAAGAAAGTATTTCAAGGAGAA
AGCTGTCCTTTGGAGCTACTCAATGTAGGACCACTAGTTGCAAAAAAATGTAACGGATTT
CCTATTCTGATCATCATGATTGCTGGAATTCTCTCTAGAAAGAAAGAGGACCCGTCTTTC
TGGCTTGAGGTTGCATATGATATAAGTTCTCATGCTTCTGTAGAGGACAGCATGAAGATG
ATACAATCAAGTTATGACCAATTAGAGGACCATTTGAAGCCTTGCCTTCTGTACATGGGA
TTGTTTCCTAAAGGTTATGAAATTCCAGTGTCTGATCTGCTGAAGTGGTGGATAGCTGAG
GAGTTTGTGCTAGAAGAAACATCAAACAGTTGCTTGAATGATCTTGTTAGAAGAAACCTA
GTAATGGTTTCTAAAAGAAGAGCTAATGGTGAAATGAAATACTGCATAGTTCTTGATCAA
GTGCGTGAGTTCTGCTTGAGAAAAATTAAAGAAGAAAAGTTCATTGAGTCCATAGTGCCG
TATAATTCATGTCAACCTGTAGATTCGGATGTACAAAGGTTATGCATGTATATACATGAC
ACTATGAAAACTGATTACAAGGAAAGGGAATCTTTTGAACAACGTCAAATGCCACTGGAG
TTCATTGCTCATCCGAAATTCGGTATATCAGGCCGTAAGAATCTGTTCCCTCTGCTGAAT
AACTTAAGACTTATTCGGGTGTTGCATTTATTGGATATCTACTTGGAAAATTCTTGGGCT
ACTGCATTTCAATCACTGACTCAGTTGAGGTTCCTTGCAATTTTTGTCAAAGCATTTGAT
TTCAA

Peptide Sequence

PEP ID

XP_016493165.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-10, partial [Nicotiana tabacum]
Sequence

MEFEELVGFREYVNVMIRQLVREPRDLDVISIVGMAGQGKTALTRKVYNNHYIVDHFDVR
AWCSISKIYNRRKLWLDILKQIKGDKRDTVDDDYSIADMLRKSLYGRRYLIILDDIWEVR
AWDDLRLCFPNTENGSRIMVTTRDVHVAMHIKHHSDPCLLPFLKDEESWELLQKKVFQGE
SCPLELLNVGPLVAKKCNGFPILIIMIAGILSRKKEDPSFWLEVAYDISSHASVEDSMKM
IQSSYDQLEDHLKPCLLYMGLFPKGYEIPVSDLLKWWIAEEFVLEETSNSCLNDLVRRNL
VMVSKRRANGEMKYCIVLDQVREFCLRKIKEEKFIESIVPYNSCQPVDSDVQRLCMYIHD
TMKTDYKERESFEQRQMPLEFIAHPKFGISGRKNLFPLLNNLRLIRVLHLLDIYLENSWA
TAFQSLTQLRFLAIFVKAFDF

Transcript Sequence

Gene sequence data has not been registered.